MPD specifications
- Unique identifier:
- OMICS_14711
- Interface:
- Web user interface
- Input data:
- A list of coordinates to amplify
- Output data:
- The final primer design summary viewed in the browser
- Computer skills:
- Basic
- Registration required:
- Yes
- Name:
- Multiplex Primer Design
- Restrictions to use:
- None
- Input format:
- BED
- Programming languages:
- Javascript, Perl
- Stability:
- Stable
- Maintained:
- Yes
MPD specifications
- Unique identifier:
- OMICS_14711
- Software type:
- Package/Module
- Restrictions to use:
- None
- Input format:
- BED
- Operating system:
- Unix/Linux, Mac OS, Windows
- License:
- GNU General Public License version 3.0
- Stability:
- Stable
- Maintained:
- Yes
- Name:
- Multiplex Primer Design
- Interface:
- Command line interface
- Input data:
- A list of coordinates to amplify
- Output data:
- The final primer design summary
- Programming languages:
- C, Perl
- Computer skills:
- Advanced
- Source code URL:
- https://codeload.github.com/wingolab-org/mpd-c/legacy.tar.gz/master
versioning
No versioning.
MPD distribution
download
MPD support
Documentation
- Documentation: https://wingolab-org.github.io/mpd-c/
Maintainer
- Thomas Wingo <>
- Thomas Wingo <>
Additional information
A registration is needed to access to tools.
forum
Hi! I was very interested in trying your web tool, but the error page below is being returned, unfortunately, when using the link from the paper or from this page.
Thanks for any thoughts!
502 Bad Gateway
nginx/1.8.1
I experienced the same error also when I tried the link.
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forum
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Credits
Publications
-
(Wingo et al., 2017)
MPD: multiplex primer design for next-generation targeted sequencing.
BMC Bioinformatics.
PMID: 28056760 DOI: 10.1186/s12859-016-1453-3
Institution(s)
Division of Neurology, Atlanta VA Medical Center, Decatur, GA, USA; Department of Neurology, Emory University School of Medicine, Atlanta, GA, USA; Department of Human Genetics, Emory University School of Medicine, Atlanta, GA, USA
Funding source(s)
Supported by the Veterans Health Administration (BX001820), National Institutes of Health (AG025688), and the Emory Integrated Genomics Core (EIGC).
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