MultiRTA statistics

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Associated diseases

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MultiRTA specifications

Information


Unique identifier OMICS_22346
Name MultiRTA
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability No
Maintained No

Maintainer


This tool is not available anymore.

Publication for MultiRTA

MultiRTA in publications

 (4)
PMCID: 4906198
PMID: 27340658
DOI: 10.1155/2016/3832176

[…] design an experiment to choose appropriate scoring function to combine sequence similarity and structural similarity. then, we compare with other state-of-the-art technologies, which are tepitope, multirta, netmhciipan-2.0, and netmhciipan-1.0. the result indicates that our approach can obtain better prediction and effectively extend current prediction methods. finally, we test on more data […]

PMCID: 3908610
PMID: 24565049
DOI: 10.1186/1477-5956-11-S1-S15

[…] comparably to the tepitope and netmhciipan2.0 approaches in identifying hla-dr epitopes and ligands, and it performs significantly better than tepitopepan in the identification of hla-dr ligands and multirta in identifying hla-dr t cell epitopes., the proposed approach owa-pssm is fast and robust in identifying ligands, epitopes and binding cores for up to 879 mhc ii molecules., the immune […]

PMCID: 3651388
PMID: 23497081
DOI: 10.1186/1471-2105-14-82

[…] alleles have also reasonable accuracy, despite requiring a large number of training examples for every allele in order to achieve adequate accuracy []. pan-specific (multi-target) methods, such as multirta [] and netmhciipan-2.0 [], were designed in order to overcome this issue. these methods can predict, with reasonable accuracy, the binding affinity of a peptide to any mhc allele, even […]

PMCID: 3004863
PMID: 21187956
DOI: 10.1371/journal.pone.0014383

[…] demonstrating the excellent transferability to a distinct hla-dp locus. the high accuracy for this allotype may be related to our observations that both the rta (data not shown) and multirta sequence-based prediction methods yielded generally higher accuracy for hla-dp allotypes compared with hla-dr allotypes. however, we find no obvious explanation for the higher hla-dp […]


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MultiRTA institution(s)
Mayo Clinic, Scottsdale, AZ, USA; School of Mathematical and Statistical Sciences, Arizona State University, Tempe, AZ, USA
MultiRTA funding source(s)
Supported by the Mayo Clinic.

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