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MultiSyn

Allows multiple synteny determination and visualization between user’s genomic data and/or published plant genome data. MultiSyn allows users to set regions of interest of species against the 18 plants provided in the webtool by choosing a species, chromosome, and input locus information at the start and end positions. It aims to aid evolutionary analysis by displaying multiple synteny. The tool provides a convenient means for biologists to analyze their sequence of interest.

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MultiSyn versioning

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MultiSyn classification

MultiSyn specifications

Software type:
Application/Script
Restrictions to use:
None
Programming languages:
Django
Stability:
Stable
Interface:
Command line interface
Operating system:
Unix/Linux
Computer skills:
Advanced
Maintained:
Yes

MultiSyn support

Maintainer

  • Tae-Ho Lee <>

Credits

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Publications

Institution(s)

Genomics Division, National Institute of Agricultural Sciences, Jeonju, Korea; Department of Biology, Kunsan National University, Gunsan-si, Jeollabuk-do, Korea; Directorate of Soybean Research, Indian Council of Agriculture Research (ICAR), Indore, Madhya Pradesh, India

Funding source(s)

Supported by “Cooperative Research Program for Agriculture Science & Technology Development (Project No. PJ0108772016)”, Rural Development Administration, Republic of Korea.

Link to literature

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