MUSIC specifications


Unique identifier OMICS_06754
Alternative name MUltiScale EnrIchment Calling
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages C, C++
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes


No version available


Publication for MUltiScale EnrIchment Calling

MUSIC citations


Methionine metabolism influences genomic architecture and gene expression through H3K4me3 peak width

Nat Commun
PMCID: 5955993
PMID: 29769529
DOI: 10.1038/s41467-018-04426-y

[…] H3K4me3 peaks were called using Bayesian Change Point, MUltiScale enrIchment Calling for ChIP-seq, and MACS2 either with (MACS2.broad) or without (iMACS2.narrow) the -broad option. Default parameters for each of these methods were used. Generation of unio […]


Features that define the best ChIP seq peak calling algorithms

Brief Bioinform
PMCID: 5429005
PMID: 27169896
DOI: 10.1093/bib/bbw035

[…] We surveyed 30 methods [,,, ] in the literature and annotated each of them in terms of how they solve sub-problems 1 and 2 ( and ). We chose Model-based Analysis for ChIP-Seq version 2 (MACS2) [], MUltiScale enrIchment Calling for ChIP-Seq (MUSIC) [], Genome wide Event finding and Motif discovery (GEM) [], Zero-Inflated Negative Binomial Algorithm (ZINBA) [], Bayesian Change Point (BCP) [] and […]

MUSIC institution(s)
Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA

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