MUSIC specifications

Information


Unique identifier OMICS_06754
Name MUSIC
Alternative name MUltiScale EnrIchment Calling
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages C, C++
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Documentation


Publication for MUltiScale EnrIchment Calling

MUSIC citations

 (2)
library_books

Methionine metabolism influences genomic architecture and gene expression through H3K4me3 peak width

2018
Nat Commun
PMCID: 5955993
PMID: 29769529
DOI: 10.1038/s41467-018-04426-y

[…] H3K4me3 peaks were called using Bayesian Change Point, MUltiScale enrIchment Calling for ChIP-seq, and MACS2 either with (MACS2.broad) or without (iMACS2.narrow) the -broad option. Default parameters for each of these methods were used. Generation of unio […]

library_books

Features that define the best ChIP seq peak calling algorithms

2016
Brief Bioinform
PMCID: 5429005
PMID: 27169896
DOI: 10.1093/bib/bbw035

[…] We surveyed 30 methods [,,, ] in the literature and annotated each of them in terms of how they solve sub-problems 1 and 2 ( and ). We chose Model-based Analysis for ChIP-Seq version 2 (MACS2) [], MUltiScale enrIchment Calling for ChIP-Seq (MUSIC) [], Genome wide Event finding and Motif discovery (GEM) [], Zero-Inflated Negative Binomial Algorithm (ZINBA) [], Bayesian Change Point (BCP) [] and […]

MUSIC institution(s)
Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA

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