Musket pipeline

Musket specifications

Information


Unique identifier OMICS_01060
Name Musket
Software type Application/Script
Interface Command line interface
Restrictions to use None
Biological technology Illumina
Operating system Unix/Linux
Computer skills Advanced
Version 1.1
Stability Stable
Requirements memusage
Maintained Yes

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Maintainer


  • person_outline Liu Yongchao <>

Publication for Musket

Musket IN pipeline

2015
PMCID: 4433549
PMID: 25573702
DOI: 10.1093/aobpla/plu086

[…] steps using dneasy (qiagen, venlo, the netherlands) according to smulders et al. (2010). dna yield and quality were visually assessed on a 1 % agarose gel., the raw reads were error-corrected using musket (liu et al. 2012b). this error-corrected set was used for the repeat assembly. prinseq-lite 0.20.04 (schmieder and edwards 2011) was used for quality control and filtering of reads (minimum […]

Musket institution(s)
Institut fur Informatik, Johannes Gutenberg Universitat Mainz, Mainz, Germany; Department of Computing and Information Systems, The University of Melbourne, VIC, Australia

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