MUSTER pipeline

MUSTER specifications

Information


Unique identifier OMICS_10829
Name MUSTER
Alternative name MUlti-Sources ThreadER
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Protein sequence
Input format FASTA
Output data The outputs of the MUSTER server include top five template proteins and the query-template alignments and full-length models built by MODELLER.
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


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Maintainer


  • person_outline Yang Zhang <>

Information


Unique identifier OMICS_10829
Name MUSTER
Alternative name MUlti-Sources ThreadER
Interface Web user interface
Restrictions to use None
Input data Protein sequence
Input format FASTA
Output data The outputs of the MUSTER server include top five template proteins and the query-template alignments and full-length models built by MODELLER.
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Yang Zhang <>

Publication for MUlti-Sources ThreadER

MUSTER IN pipeline

2018
PMCID: 5826306
PMID: 29515519
DOI: 10.3389/fendo.2018.00043

[…] analog (pdb: 1go9) containing a d-phe residue at position 12 and alpha-aminoisobutyric acid in position 15 (32)., for crf-bp, top scoring models produced by threading-based approaches identified by muster and phyre2 servers (33, 34) were retrieved, aligned, and used as starting templates to generate a human crf-bp model. fragments from gastric intrinsic factor receptor cubilin (pdb: 3kq4) (35) […]

MUSTER institution(s)
Center for Bioinformatics and Department of Molecular Bioscience, University of Kansas, Lawrence, KS, USA
MUSTER funding source(s)
KU Start-up Fund; Grant number: 06194

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