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Mutex specifications


Unique identifier OMICS_09739
Name Mutex
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes


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  • person_outline Emek Demir <>

Publication for Mutex

Mutex in publications

PMCID: 5918454
PMID: 29697362
DOI: 10.1186/s12920-018-0347-9

[…] pressure on the other members is diminished or even nullified. as a result, the mutation pattern of alternative driver genes appears almost mutually exclusive among different patients. we use mutex program [] to identify mutually exclusive set of genes with a common downstream effect on the signaling network and implemented survival analysis for altered vs. unaltered patient groups. […]

PMCID: 5684369
PMID: 29133831
DOI: 10.1038/s41598-017-15571-7

[…] point from nearer to farther. points that pass the local optimization step are added to the octree (the history buffer). lastly, we synchronized reading/writing to the octree using c ++ 09 shared mutex., for the pdbbind dataset, we collected the output data as pdbqt files, and compared our results to the experimental data. we used originlab to facilitate studying the several dimensions […]

PMCID: 5656717
PMID: 29104852
DOI: 10.1186/s40679-017-0048-z

[…] or the device, respectively. we refer to a gpu worker thread as a host thread that manages work dispatched to a single device context. whenever one of these worker threads is available, it queries a mutex-synchronized dispatcher that returns a unique work id or range of ids. the corresponding work is then consumed, and the dispatcher required until no more work remains. this computational model, […]

PMCID: 5628952
PMID: 28939077
DOI: 10.1016/j.oraloncology.2017.08.003

[…] previously described in hpv-negative hnscc tumors , (). interestingly, egfr amplification was significantly mutually exclusive to ccnd1, fgf19, oraov1 and fadd amplification (p-value < 0.01, mutex) including tcga-tongue cohort () , suggesting unique molecular features associated in our study cohort. these novel genetic associations could serve as pathognomonic alterations in hpv-negative […]

PMCID: 5732610
PMID: 29266136
DOI: 10.1186/s40649-017-0043-5

[…] $$a^\text{t}x$$\end{document}atx to compute ax.the second fact above is particularly important: when a is stored in the csc format, computing ax with multiple threads would incur atomic operations or mutex locks to avoid race conditions between different threads. implementing multithreaded \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} […]

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Mutex institution(s)
Computational Biology Center, Memorial Sloan Kettering Cancer Center, New York, NY, USA; Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York, NY, USA; Tri-Institutional Training Program in Computational Biology and Medicine, New York, NY, USA
Mutex funding source(s)
This research was supported by National Institutes of Health grants (U41HG006623) and (GM103504).

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