MyProteinNet specifications

Information


Unique identifier OMICS_08544
Name MyProteinNet
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Esti Yeger-Lotem

Publication for MyProteinNet

MyProteinNet citations

 (2)
library_books

Comparative analysis of housekeeping and tissue specific driver nodes in human protein interaction networks

2016
BMC Bioinformatics
PMCID: 5016887
PMID: 27612563
DOI: 10.1186/s12859-016-1233-0

[…] in a particular tissue. A gene is considered to be expressed in a tissue if its expression value exceeds a stringent threshold. For detail, refer to []. In this study, we use the data provided in the MyProteinNet database []. […]

library_books

The Somatic Nature of Cancer Allows It to Affect Highly Constrained Genes

2016
Genome Biol Evol
PMCID: 4898816
PMID: 27190005
DOI: 10.1093/gbe/evw110

[…] ersion tables were extracted from the Ensembl biomart () and ANNOVAR (). Gene expression data were extracted as described in TissueNet (). Data on protein–protein interaction were downloaded from the MyProteinNet site (). Data were combined into a database written in an adaptation of Simple Query Language (SQL) using the sqlite3 Python module.Statistical tests were performed using in-house scripts […]

MyProteinNet institution(s)
Department of Clinical Biochemistry & Pharmacology, Faculty of Health Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel

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