mzQuantML specifications


Unique identifier OMICS_14624
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++
Computer skills Advanced
Version 1.0.1
Stability Stable
Source code URL
Maintained Yes



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  • person_outline Andrew Jones <>

mzQuantML article

mzQuantML institution(s)
Quantitative Biology Center and Department of Computer Science, Center for Bioinformatics, University of Tübingen, Tübingen, Germany; Institute of Integrative Biology, University of Liverpool, Liverpool, UK; Medizinisches Proteom-Center, Ruhr-Universität Bochum, Bochum, Germany; Bioinformatics Group, Cranfield Health, Cranfield University, Cranfield, UK; Institute for Systems Biology, Seattle, WA, USA; EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK; Proteomics Facility, Centro Nacional de Biotecnología - CSIC, Madrid, Spain
mzQuantML funding source(s)
The tool is funded by MedSys (BMBF grant number 0315450), the EU FP7 “ProteomeXchange” grant (grant number 260558), LipidomicNet (grant number 202272), PRIME-XS (grant number 262067) and MARINA (grant number 236215), CLIB (“Cluster Industrielle Biotechnologie”) within the QProM project (contract number 616 40003 0315413B), P.U.R.E. (Protein Unit for Research in Europe), a project of Nordrhein-Westfalen, a federal state of Germany, BBSRC (BB/I00095X/1, BB/H024654/1 and BB/I001131/1), NIGMS grant GM087221, NHGRI grant HG005805, the Systems Biology Initiative of the State of Luxembourg, the Wellcome Trust (grant number WT085949MA), the Spanish Research Council (CSIC) and the Spanish National Proteomics Institute (ProteoRed-ISC III) (grant number 2005X747_3), BMBF (SARA - FKZ 0315395F and BIOMARKERS - FKZ 01GI1104A).

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