Non-allelic homologous recombination (NAHR) is a common mechanism for generating genome rearrangements and is implicated in numerous genetic disorders, but its detection in high-throughput sequencing data poses a serious challenge.Source text:(Parks et al., 2015) Detecting…
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HREfinder
Desktop

HREfinder Homologous Recombination Events finder

Detects homologous recombination events from single-nucleotide polymorphism…

Detects homologous recombination events from single-nucleotide polymorphism (SNP) data. Based on SNP alleles calls and locations, it breaks the genomes into locally colinear blocks, and looks for…

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detect-NAHR
Desktop

detect-NAHR

Detects non-allelic homologous recombination (NAHR) from short-read data.…

Detects non-allelic homologous recombination (NAHR) from short-read data. detect-NAHR is a Bayesian algorithm that probabilistically models NAHR based on the rules of the mechanism and employs a…

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