nanoPARE specifications


Unique identifier OMICS_32657
Name nanoPARE
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl, Python, R, Shell (Bash)
Computer skills Advanced
Version 1.0
Stability Stable
TAR aligner, Samtools, Bedtools, Cutadapt
Maintained Yes




No version available


  • person_outline Michael Nodine

Publication for nanoPARE

nanoPARE institution(s)
Gregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna, Austria
nanoPARE funding source(s)
Supported by funding from the European Research Council under the European Union’s Horizon 2020 research and innovation program (Grant 6 637888) and the DK Graduate Program in RNA Biology (DK-RNA) sponsored by the Austria 7 Science Fund (FWF, DK W 1207-B09).

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