NanoPlot specifications

Information


Unique identifier OMICS_20267
Name NanoPlot
Software type Application/Script
Interface Graphical user interface
Restrictions to use None
Input data Some reads or alignments.
Input format fastq, bam
Output data Some multiple plots and a statistical summary.
Biological technology Pacific Biosciences, Oxford Nanopore
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
License GNU General Public License version 3.0
Computer skills Medium
Version 1.0.0
Stability Stable
Requirements matplotlib, pysam, pandas, numpy, seaborn, biopython
Maintained Yes

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Documentation


Maintainer


  • person_outline wdecoster <>

Information


Unique identifier OMICS_20267
Name NanoPlot
Interface Web user interface
Restrictions to use None
Computer skills Basic
Version 1.13.0
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline wdecoster <>

Publication for NanoPlot

NanoPlot institution(s)
Neurodegenerative Brain Diseases Group, Center for Molecular Neurology, VIB & University of Antwerp, Antwerp, Belgium; Neuromics Support Facility, Center for Molecular Neurology, VIB & Univ of Antwerp, Antwerp, Belgium; Dept of Biomolecular Engineering and Bioinformatics, University California Santa Cruz, Santa Cruz, CA, USA

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