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Allows biologists to take raw data produced by a NanoString nCounter analysis system and easily interpret differential expression analysis of this data represented through a heatmap.

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1 user review

1 user review

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Mike

Tried using R to analyze large data set and was finally able to after getting help from biostatistician (she did all the work). Found this software and it made everything so much easier to get the final product.

NanoStriDE forum

NanoStriDE versioning

No versioning.

NanoStriDE classification

NanoStriDE specifications

Software type:
Package
Restrictions to use:
None
License:
GNU General Public License version 2.0
Stability:
Stable
Interface:
Command line interface
Operating system:
Unix/Linux
Computer skills:
Advanced

Publications

  • (Brumbaugh et al., 2011) NanoStriDE: normalization and differential expression analysis of NanoString nCounter data. BMC bioinformatics.
    PMID: 22177214

NanoStriDE support

Maintainer

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