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NanoStringNorm | An extensible R package for the pre-processing of NanoString mRNA and miRNA data

A set of tools for normalizing, diagnostics and visualization of NanoString nCounter data. Key features include an extensible environment for method comparison and new algorithm development, integrated gene and sample diagnostics, and facilitated downstream statistical analysis. By standardizing code and automating error capture, NanoStringNorm will enable more reproducible and robust analysis of NanoString datasets.

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NanoStringNorm classification

NanoStringNorm specifications

Unique identifier:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
GNU General Public License version 2.0
gdata, vsn
Software type:
Restrictions to use:
Programming languages:
Computer skills:

NanoStringNorm distribution


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NanoStringNorm support



  • Paul Boutros <>


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Informatics and Biocomputing Platform, Ontario Institute for Cancer Research, Toronto, Canada; Ontario Cancer Institute and Campbell Family Institute for Cancer Research, Princess Margaret Hospital, University Health Network, Toronto, Canada; Departments of Radiation Oncology and Medical Biophysics, University of Toronto, Toronto, Canada

Funding source(s)

Ontario Institute for Cancer Research; Ontario Ministry of Health and Long Term Care (OMOHLTC); Dr Mariano Elia Chair in Head & Neck Cancer Research; philanthropic support from the Wharton family, Joe's Team and Gordon Tozer

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