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Publication for NasoniaBase
Transcriptome profiling of Diachasmimorpha longicaudata towards useful molecular tools for population management
[…] e package, specifically Nucmer,  and the Circos visualization tool  were used. The Honey Bee Genome Sequencing Consortium assembly Amel_4.5 and Official Gene Set OGSv3.2 (www.beebase.org) and the NasoniaBase genome Assembly Nvit_1.0 (http://hymenopteragenome.org/nasonia/) databases were used. […]
Characterizing the Infection Induced Transcriptome of Nasonia vitripennis Reveals a Preponderance of Taxonomically Restricted Immune Genes
[…] We aligned our RNA-seq reads to the N. vitripennis reference genome version 1.0 , available from NasoniaBase. We used a combination of TopHat2 and Stampy to map our sequencing reads to the reference scaffolds, in order to leverage the unique strengths of each program and maximize mapping succes […]
Development of a Nasonia vitripennis outbred laboratory population for genetic analysis
[…] mina protocols. The unpaired library was run on a single lane and the paired-end library on five lanes of an Illumina Genome Analyzer II (Illumina, San Diego, CA, USA). Sequence data were provided to NasoniaBase () and submitted to the NCBI Short Read Archive with accession no. SRP022050.Reads were aligned to the v2.0 of the N. vitripennis genome () using Mosaik Aligner v1.1.0021 (https://code.goo […]
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