NbmiRTar statistics

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NbmiRTar specifications

Information


Unique identifier OMICS_14644
Name NbmiRTar
Interface Web user interface
Restrictions to use None
Input data miRNA(s) and 3’ UTR sequences
Output data Predicted miRNA targets
Computer skills Basic
Stability No
Maintained No

Maintainer


This tool is not available anymore.

Publication for NbmiRTar

NbmiRTar in publications

 (37)
PMCID: 5894727
PMID: 29670361
DOI: 10.2147/OTT.S156737

[…] (http://c1.accurascience.com/mirecords/) is an online integrated resource produced by 11 established mirna target prediction programs including targetscan, microinspector, rna22, diana-microt, nbmirtar, miranda, pictar, mitarget, pita, rnahybrid, and mirtarget2. the genes predicted by at least four programs were identified as the targets of mirnas., ten hcc tissues and matched nontumor […]

PMCID: 5901046
PMID: 29377183
DOI: 10.1002/jat.3583

[…] (http://c1.accurascience.com/mirecords) was selected as the most suitable for this study as it integrates 11 target prediction programs (diana‐microt, microinspector, miranda, mirtarget2, mitarget, nbmirtar, pictar, pita, rna22, rnahybrid and targetscan) from which extensive lists of both predicted and validated putative mirna target genes can be generated (xiao et al., ). the complete list […]

PMCID: 5753510
PMID: 29298665
DOI: 10.1186/s12885-017-3941-x

[…] medusa software was used to perform the network., we analyzed the predicted targets of mir-34a by applying 11 independent software: diana-microt, microinspector, miranda, mirtarget2, mitarget, nbmirtar, pictar, pita, rna22, rnahybrid and targetscan. the results were considered reliable when the results were calculated by four or more software. go analysis, pathway analysis and network […]

PMCID: 5783528
PMID: 29257318
DOI: 10.3892/mmr.2017.8274

[…] performed using the david database., mirecords (http://c1.accurascience.com/mirecords/) is an online program which integrates mirna target predictions made by 11 established prediction databases (nbmirtar, rna22, microinspector, pictar, pita, rnahybrid, and targetscan, diana-microt, miranda, mirtarget2 and mitarget) (). in this study, potential targets of demirnas were identified by at least […]

PMCID: 5438360
PMID: 28526870
DOI: 10.1038/s41598-017-02294-y

[…] roles of emerging mir-532, we performed a bioinformatics prediction of the possible targets via the use of multiple target prediction databases (diana, microinspector, miranda, mirtarget, mitarget, nbmirtar, pictar, pita, rna22, rnahybrid and targetscan). the targets which were simultaneously predicted by at least five prediction databases were selected for subsequent gene ontology (go) […]


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NbmiRTar institution(s)
The Wistar Institute, Philadelphia, PA, USA
NbmiRTar funding source(s)
This project is funded in part by U01 CA85060 and the Pennsylvania Department of Health (PA DOH Commonwealth Universal Research Enhancement Program), and Tobacco Settlement grants ME01-740 and SAP 4100020718, NSF RCN 0090286.

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