NCLscan specifications


Unique identifier OMICS_10194
Name NCLscan
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Version 1.3
Stability Stable
Bedtools, Samtools, BLAT, BWA, Novoalign, novoindex
Maintained Yes


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  • person_outline Trees-Juen Chuang <>

Publication for NCLscan

NCLscan institution(s)
Division of Physical and Computational Genomics, Genomics Research Center, Academia Sinica, Taipei, Taiwan
NCLscan funding source(s)
Genomics Research Center, Academia Sinica, Taiwan (internal funding); Ministry of Science and Technology (MOST), Taiwan [MOST 103-2628-B-001-001-MY4, MOST 103-2911-I-001-507]

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