lncRNASNP
lncRNASNP
A database providing comprehensive resources of single nucleotide polymorphisms (SNPs) in…
A database providing comprehensive resources of single nucleotide polymorphisms (SNPs) in human/mouse lncRNAs. It contains SNPs in lncRNAs, SNP effects on lncRNA structure and lncRNA:miRNA binding. LncRNASNP also integrates GWAS data and miRNA…
MicroSNiPer
MicroSNiPer
Predicts the impact of a SNP on putative microRNA targets. MicroSNiPer interrogates the…
Predicts the impact of a SNP on putative microRNA targets. MicroSNiPer interrogates the 3'-untranslated region and predicts if a SNP within the target site will disrupt/eliminate or enhance/create a microRNA binding site. This application…
miRdSNP
miRdSNP
A database of manually curated dSNPs on the 3'UTRs of human genes from available…
A database of manually curated dSNPs on the 3'UTRs of human genes from available publications in PubMed.
mrSNP
mrSNP
Provides a web service for researchers working especially with RNA-Seq Data, to predict…
Provides a web service for researchers working especially with RNA-Seq Data, to predict the impact of a SNP in a 3UTR on miRNA binding.
MSbind
MSbind
Calculates features of meta-stable RNA secondary structure target sites.
Calculates features of meta-stable RNA secondary structure target sites.
PolymiRTS Database
PolymiRTS Database
An integrated platform for analyzing the functional impact of genetic polymorphisms in…
An integrated platform for analyzing the functional impact of genetic polymorphisms in miRNA seed regions and miRNA target sites. The browse and search pages of PolymiRTS allow users to explore the relations between the PolymiRTSs and gene…
RNAsnp Web Server
RNAsnp Web Server
An efficient method to predict the effect of SNPs on local RNA secondary structure based…
An efficient method to predict the effect of SNPs on local RNA secondary structure based on the RNA folding algorithms implemented in the Vienna RNA package.
SubmiRine
SubmiRine
An open-source software package for predicting microRNA target site variants (miR-TSVs)…
An open-source software package for predicting microRNA target site variants (miR-TSVs) from clinical genomic data sets that measure miRNA expression, gene expression, and genotype. The main benefits of SubmiRine are that it allows for de novo…