Nebula specifications

Information


Unique identifier OMICS_00424
Name Nebula
Interface Web user interface
Restrictions to use None
Programming languages Perl, R
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Nebula Team <>

Publication for Nebula

Nebula in publication

PMCID: 5727025
PMID: 29233972
DOI: 10.1038/s41467-017-01070-w

[…] sequenced with paired-end 75 bp reads. sequenced reads were aligned to the mouse genome (mm10 assembly) with bowtie 3. the output of bowtie was converted to bed files using macs (version 1.0.1). the nebula-web server was then used for peak calling with findpeaks, de novo motif discovery with chipmunk and statistical analysis. the golden helix genome browser software allowed us to visualise […]


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Nebula institution(s)
Institut Curie, Paris, France; INSERM, U900, Bioinformatics and Computational Systems Biology of Cancer, Paris, France; Mines ParisTech, Fontainebleau, France; INSERM, U830, Genetics and Biology of Cancers, Paris, France
Nebula funding source(s)
Supported by The ‘Projet Incitatif et Collaboratif Bioinformatique et Biostatistiques’ of the Institut Curie, and the Ligue Nationale Contre le Cancer.

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