NetICS statistics

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NetICS specifications


Unique identifier OMICS_27943
Name NetICS
Alternative name Network-based Integration of Multi-omics Data
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages MATLAB
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Niko Beerenwinkel <>
  • person_outline Christos Dimitrakopoulos <>

Publication for Network-based Integration of Multi-omics Data

NetICS in publications

PMCID: 5510862
PMID: 28708885
DOI: 10.1371/journal.pone.0181248

[…] under an identical light condition, and the percentage of areas of the glomerular tuft stained was digitally quantitated based on red, green, and blue hues (image pro-plus 6.0 software, media cyber netics, silver spring, md). an average of 6 fields (magnification, 3200x) was assessed for each animal (n = 6~8 per group)., results are expressed as mean ± standard error of mean (sem). analyses […]

PMCID: 5129937
PMID: 27322431
DOI: 10.18632/oncotarget.10050

[…] then slices were incubated in 1 % ttc for 15 min at 37°c. the infarct area (white) and the area at risk (red and white) were determined using an image analyzer (image-pro plus 3.0, media cyber-netics, silver spring, md, usa). infarct size was expressed as a percentage of the risk area volume (%, infarct size/risk area)., rats were anesthetized with sodium pentobarbital and cardiac function […]

PMCID: 3176482
PMID: 21854562
DOI: 10.1186/1472-6882-11-66

[…] (cats claw), boswellia spp., lepidium meyenii (maca) and pharmaceutical grade l-leucine (ajinimoto usa inc, fort lee, nj). the final mixture is a commercial product called flexsure, (vital g-netics, quitman, tx) and the recommended dose contains 1000 mg lepidium meyenii, 300 mg uncaria tomentosa, 200 mg boswelia serrata, 700 mg l-leucine. oa chondrocytes at 80% confluence were serum […]

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NetICS institution(s)
Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland; SIB Swiss Institute of Bioinformatics, Basel, Switzerland; Biozentrum, University of Basel, Basel, Switzerland
NetICS funding source(s)
Supported by the SIB PhD Fellowship programme and partially by the ERC Synergy Grants (609883 & 633974).

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