NetProphet specifications

Information


Unique identifier OMICS_13787
Name NetProphet
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
License BSD 2-clause “Simplified” License
Computer skills Advanced
Version 2.0
Stability Beta
Maintained Yes

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Maintainer


  • person_outline Michael Brent <>

Publications for NetProphet

NetProphet in publication

PMCID: 4850258
PMID: 27094327
DOI: 10.1128/mBio.00313-16

[…] of capsule regulation., to define the transcriptional network that regulates capsule, we have been applying computational and genomic tools (, ). network analysis of gene expression data (using our netprophet algorithm []) indicated that usv101, a c2h2 transcription factor named for a saccharomyces cerevisiae ortholog (see below), regulates multiple genes known to be required for capsule growth […]


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NetProphet institution(s)
Department of Computer Science and Engineering and Center for Genome Sciences and Systems Biology Washington University, Saint Louis, MO, USA; Department of Mathematics, Washington University, Saint Louis, MO, USA
NetProphet funding source(s)
Supported in part by NIH T32 training grant HG000045 (National Human Genome Research Institute) and R01 grants AI087794 (National Institute for Allergy and Infectious Disease) and GM100452 (National Institute of General Medical Sciences).

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