NetSeed statistics

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Citations per year

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Popular tool citations

chevron_left Metabolic network analysis Reverse ecology analysis chevron_right
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Tool usage distribution map

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Associated diseases

Associated diseases

NetSeed specifications


Unique identifier OMICS_12612
Name NetSeed
Interface Web user interface
Restrictions to use Academic or non-commercial use
Programming languages Perl
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline Elhan Borenstein <>

Publication for NetSeed

NetSeed in publication

PMCID: 5572346
PMID: 28878756
DOI: 10.3389/fmicb.2017.01606

[…] an environment-specific network, following the procedure outlined in . similarly, a meta-network was constructed, containing all enzymatic functions annotated across the metagenomic data., using the netseed algorithm (), through its implantation in netcmpt (), an approximation of the relevant metabolic environment was retrieved for each of the five networks (meta-network and four […]

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NetSeed institution(s)
Department of Genome Sciences; Department of Computer Science and Engineering, University of Washington, Seattle, WA, USA; Santa Fe Institute, Santa Fe, NM, USA

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