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Network discovery software tools | Biomedical text mining

Antimicrobial…
Dataset

Antimicrobial Combination Networks

Supports the mining of scientific literature and enables the reconstruction of…

Supports the mining of scientific literature and enables the reconstruction of recently documented antimicrobial combinations. Antimicrobial Combination Networks contains data on antimicrobial…

MAT
Web

MAT MetastasisWay Annotation Tool

A network visualization and curation tool to assist metastasis researchers…

A network visualization and curation tool to assist metastasis researchers retrieve network information of interest while browsing through the large volume of studies in PubMed. MAT can recognize…

BELIEF
Web

BELIEF Biological Expression Language Information Extraction WorkFlow

Accelerates information extraction from the biomedical literature and curate…

Accelerates information extraction from the biomedical literature and curate causal and correlative relationships encoded into biological expression language. BELIEF uses a text mining pipeline to…

ProteoLens
Desktop

ProteoLens

Supports flexible network data association specification using rules,…

Supports flexible network data association specification using rules, integrates data processing through relational databases and GML data files, and scalable data visualization through layered…

PESCADOR
Web
RelEx
Desktop

RelEx

An approach for relation extraction from free text. RelEx is based on natural…

An approach for relation extraction from free text. RelEx is based on natural language preprocessing producing dependency parse trees and applying a small number of simple rules to these trees.

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