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Popular tool citations

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NetworkAnalyst specifications

Information


Unique identifier OMICS_04114
Name NetworkAnalyst
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Taxon


  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus

Publication for NetworkAnalyst

NetworkAnalyst in publications

 (3)
PMCID: 5717815
PMID: 29208006
DOI: 10.1186/s13046-017-0651-9

[…] using the lynx systems biology tool []. all significance tests were two-sided, and a false discovery rate less than 0.05 was considered significant. biological network analysis was performed with networkanalyst software [, ]. protein-protein interaction information was retrieved from the imex interactome database []. a dense network was connected by retaining only the seed proteins as well […]

PMCID: 4621862
PMID: 26503507
DOI: 10.1186/s12864-015-2102-3

[…] analysis (ipa) database and software (www.ingenuity.com) and the fisher exact test to determine significant enrichments. we used the network analyst tool to generate the protein-protein interactome. networkanalyst uses a comprehensive high-quality protein-protein interaction (ppi) database based on innatedb []. the database contains manually curated protein interaction data from published […]

PMCID: 5668876
PMID: 29124183
DOI: 10.1016/j.bbrep.2015.08.011

[…] were extracted from uniprotkb and from the literature using chilibot , rlims-p and gopubmed information retrieval and text mining tools., network representation and analysis were performed with networkanalyst tool using the protein list functionality and the predicted class-iii substrates from bian et al. dataset as the input list. the network, 3509 nodes (193 seeds) and 8032 edges […]


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NetworkAnalyst institution(s)
Department of Microbiology and Immunology, University of British Columbia, Vancouver, Canada Centre for Microbial Diseases and Immunity Research, University of British Columbia, Vancouver, Canada; Wellcome Trust Sanger Institute, Hinxton, UK

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