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NeuroElf specifications

Information


Unique identifier OMICS_14801
Name NeuroElf
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages MATLAB
Computer skills Advanced
Version 1.1
Stability Stable
Maintained Yes

Versioning


No version available

Documentation


NeuroElf citations

 (47)
library_books

Knowledge acquisition is governed by striatal prediction errors

2018
Nat Commun
PMCID: 5919975
PMID: 29700377
DOI: 10.1038/s41467-018-03992-5

[…] uction and volume-based statistical analysis.All data were preprocessed and analyzed using BrainVoyager QX 2.8 (Brain Innovation) in combination with in-house code (MATLAB 7.14 R2012a; MathWorks) and NeuroElf (version 1.0; http://neuroelf.net/). The first five volumes from the beginning of each scan were discarded. Preprocessing of the remaining images included realignment, removal of head-motion […]

call_split

History of Suicide Attempt Is Associated with Reduced Medial Prefrontal Cortex Activity during Emotional Decision Making among Men with Schizophrenia: An Exploratory fMRI Study

2018
PMCID: 5852894
PMID: 29686902
DOI: 10.1155/2018/9898654
call_split See protocol

[…] ter size of 343 mm3 was required to correct for multiple comparisons at p < 0.05, brain-wise. We also performed correlation analyses between regional BOLD responses and clinical variables. The MATLAB NeuroElf toolbox (http://neuroelf.net) and the ggplot2 plotting system for R (http://ggplot2.org) were used for visualization. The open-source image editor GIMP (http://www.gimp.org) was used to build […]

library_books

Taking two to tango: fMRI analysis of improvised joint action with physical contact

2018
PLoS One
PMCID: 5764359
PMID: 29324862
DOI: 10.1371/journal.pone.0191098

[…] ere brought forward into a random-effects analysis. The resulting statistical parametric maps were interpolated to facilitate comparison between conditions. Talairach coordinates were extracted using NeuroElf (neuroelf.net). […]

library_books

Distributed neural representation of saliency controlled value and category during anticipation of rewards and punishments

2017
Nat Commun
PMCID: 5714958
PMID: 29203854
DOI: 10.1038/s41467-017-02080-4

[…] of 30° to the AC-PC axis, 3 × 3 × 4 mm3, 64 × 64 matrix in a 192 × 192 mm2 FOV) and local shimming to the field of view. Analysis of the imaging data were conducted using BrainVoyager QX Version 2.8, NeuroElf V1.1 software packages (http://www.neuroelf.net), the RSA toolbox, and additional in-house Matlab functions. Functional imaging data preprocessing included discarding the first 16 volumes, mo […]

call_split

Moral processing deficit in behavioral variant frontotemporal dementia is associated with facial emotion recognition and brain changes in default mode and salience network areas

2017
PMCID: 5745238
PMID: 29299378
DOI: 10.1002/brb3.843
call_split See protocol

[…] Brain imaging data were analyzed using Brainvoyager 20.2, SPM12 (Wellcome Trust Centre for Neuroimaging, UCL, London, UK) running under MATLAB R2008a, NeuroElf v11_6401 (www.neuroelf.net) and in‐house developed processing routines. […]

library_books

Heavy Drinking in College Students Is Associated with Accelerated Gray Matter Volumetric Decline over a 2 Year Period

2017
PMCID: 5627037
PMID: 29033801
DOI: 10.3389/fnbeh.2017.00176

[…] E) as implemented in the TFCE toolbox (http://dbm.neuro.uni-jena.de/tfce/). Resulting maps were thresholded at the p < 0.05 family wise error (FWE) whole brain corrected level and displayed using the NeuroElf toolbox (http://neuroelf.net/). […]

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