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Next Generation Sequencing Eclipse Plugin NGSEP

The main functionality of NGSEP is the variants detector, which allows to make simultaneous discovery of SNVs, small indels, and CNVs.

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NGSEP forum

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NGSEP classification

NGSEP specifications

Software type:
Framework/Library
Restrictions to use:
None
Programming languages:
Java
Stability:
Stable
Interface:
Graphical user interface
Operating system:
Unix/Linux
Computer skills:
Medium
Maintained:
Yes

NGSEP distribution

versioning

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No versioning.

NGSEP support

Documentation

Credits

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Publications

Institution(s)

Agrobiodiversity research area, International Center for Tropical Agriculture (CIAT),Cali, Colombia; Laboratory of Molecular Cell Biology, Department of Biology, Institute of Botany and Microbiology, KU Leuven, Leuven-Heverlee, Flanders, Belgium; Department of Molecular Microbiology, VIB, Leuven-Heverlee, Flanders, Belgium; VIB Laboratory of Systems Biology, KU Leuven, Gaston Geenslaan, Flanders, Belgium; Laboratory for Genetics and Genomics, Centre of Microbial and Plant Genetics, KU Leuven, Leuven-Heverlee, Flanders, Belgium

Link to literature

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