NextGenMap specifications

Information


Unique identifier OMICS_00672
Name NextGenMap
Alternative name Next-Gen Mapper
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format FASTA, FASTQ, SAM, BAM
Output format BAM, SAM
Operating system Unix/Linux, Mac OS, Windows
Parallelization CUDA
Computer skills Advanced
Version 0.5.0
Stability Stable
Source code URL https://codeload.github.com/Cibiv/NextGenMap/zip/master
Maintained Yes

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Documentation


NextGenMap article

NextGenMap institution(s)
Center for Integrative Bioinformatics Vienna, Max F Perutz Laboratories, University of Vienna, Medical University of Vienna, Vienna, Austria; Bioinformatics and Computational Biology, Faculty of Computer Science, University of Vienna, Vienna, Austria
NextGenMap funding source(s)
This work was supported by Deutsche Forschungsgemeinschaft SPP1174 [HA1628-9-2].

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