Features Company Pricing

neXtProt

Offers a seamless integration of and navigation through protein-related data. NeXtProt contains proteomics data for over 85% of human proteins. Moreover, this tool includes over 8000 phenotypic observations for over 4000 variations in a number of genes involved in hereditary cancers and channelopathies. All of the data are available via a user interface and FTP site. An API access and a SPARQL endpoint are also provided for more technical applications.

neXtProt specifications

Dataset Forum (0)

Information

Unique identifier	OMICS_03915
Name	neXtProt
Restrictions to use	None
Community driven	No
Data access	File download, Browse
User data submission	Not allowed
Version	2.3.0
Maintained	Yes

Taxon

Primates
- Homo sapiens

Subtool

Peptide uniqueness checker

Documentation

Documentation: https://www.nextprot.org/about/nextprot

Maintainers

Pascale Gaudet <>
Lydie Lane <>

Publications for neXtProt

The neXtProt knowledgebase on human proteins: 2017 update.

2017 Nucleic Acids Res

PMCID: 5210547

PMID: 27899619

DOI: 10.1093/nar/gkw1062

Annotation of functional impact of voltage-gated sodium channel mutations.

2017 Hum Mutat

PMCID: 5413847

PMID: 28168870

DOI: 10.1002/humu.23191

The neXtProt peptide uniqueness checker: a tool for the proteomics community.

2017 Bioinformatics

PMID: 28520855

The neXtProt knowledgebase on human proteins: current status.

2015 Nucleic Acids Res

PMCID: 4383972

PMID: 25593349

DOI: 10.1093/nar/gku1178

NeXtProt: organizing protein knowledge in the context of human proteome projects.

2013 J Proteome Res

PMID: 23205526

NeXtProt: a knowledge platform for human proteins.

2012 Nucleic Acids Res

PMCID: 3245017

PMID: 22139911

DOI: 10.1093/nar/gkr1179

neXtProt institution(s)

Department of Human Protein Science, Faculty of Medicine, University of Geneva, Geneva, Switzerland; CALIPHO Group, SIB Swiss Institute of Bioinformatics, CMU, Geneva, Switzerland

neXtProt funding source(s)

Supported by SIB Swiss Institute of Bioinformatics and University of Geneva.

neXtProt review

Daniel Teixeira

2017-11-08, 12:46

Dataset

Great platform with lots of data integrated, fast search and modern REST API in JSON! And the support team is very helpful.