Main logo
?
tutorial arrow
×
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.

NGS QC Toolkit

A toolkit for the quality control (QC) of next generation sequencing (NGS) data. The toolkit comprises of user-friendly standalone tools for quality control of the sequence data generated using Illumina and Roche 454 platforms with detailed results in the form of tables and graphs, and filtering of high-quality sequence data. It also includes few other tools, which are helpful in NGS data quality control and analysis.

User report

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

0 user reviews

No review has been posted.

NGS QC Toolkit forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

NGS QC Toolkit classification

NGS QC Toolkit specifications

Software type:
Package/Module
Restrictions to use:
None
Output format:
FASTQ, HTML report, tab-delimited text
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Stability:
Stable
Interface:
Command line interface
Input format:
FASTQ
Biological technology:
Illumina, Roche
Programming languages:
R
Version:
2.3.3
Maintained:
Yes

NGS QC Toolkit distribution

versioning

tutorial arrow
×
Upload and version your source code
Get a DOI for each update to improve tool traceability. Archive your releases so the community can easily visualize progress on your work.
Facilitate your tool traceability
Sign up for free to upload your code and get a DOI

No versioning.

NGS QC Toolkit support

Maintainer

  • Mukesh Jain <>

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship

Publications

Institution(s)

Functional Genomics and Bioinformatics Laboratory, National Institute of Plant Genome Research (NIPGR), New Delhi, India

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.