NGS-QCbox specifications


Unique identifier OMICS_12194
Name NGS-QCbox
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input format FASTQ
Biological technology Illumina
Operating system Unix/Linux
Parallelization OpenMP
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Java, bash, Python, NGS-QCBox, Raspberry
Source code URL
Maintained Yes


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  • person_outline Rajeev K. Varshney <>

Publication for NGS-QCbox

NGS-QCbox institution(s)
International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India; School of Plant Biology and Institute of Agriculture, The University of Western Australia, Crawley, Australia
NGS-QCbox funding source(s)
Authors are thankful to the CGIAR Generation Challenge Program for financial support.

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