NGS-Trex specifications

Unique identifier:
OMICS_18473
Software type:
Pipeline/Workflow
Restrictions to use:
None
Programming languages:
Perl, PHP
Stability:
Stable
Name:
NGS TRanscriptome profile EXplorer
Interface:
Web user interface
Input format:
FASTA, FASTQ
Computer skills:
Basic
Maintained:
Yes

NGS-Trex support

Maintainer

  • Flavio Mignone <>

Additional information

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Publications

Institution(s)

Dipartimento di Chimica, Università degli Studi di Milano, Milano, Italy; Dipartimento di Scienze e Innovazione Tecnologica, Università del Piemonte Orientale, Alessandria, Italy; Dipartimento di Bioscienze, Biotecnologie e Scienze Farmacologiche, Università degli Studi di Bari “A. Moro”, Bari, Italy; Istituto di Biomembrane e Bioenergetica, Consiglio Nazionale delle Ricerche, Bari, Italy

Funding source(s)

Supported by “Ministero dell’Istruzione, Università e Ricerca” (MIUR, Italy): “PRIN 2009- Large-scale identification and characterization of alternative splicing in the human transcriptome through computational and experimental approaches"; Consiglio Nazionale delle Ricerche: Flagship Project “Epigen”, PNR-CNR Aging Program 2012-2014, Italian Research Foundation for amyotrophic lateral sclerosis (AriSLA) and by Italian Ministry for Foreign Affairs (Italy-Israel actions).

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