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NGSadmix | Estimating individual admixture proportions from NGS data

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A method for inferring an individual's ancestry that takes the uncertainty introduced in next generation sequencing data into account. This is achieved by working directly with genotype likelihoods that contain all relevant information of the unobserved genotypes.

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NGSadmix classification

NGSadmix specifications

Unique identifier:
OMICS_01553
Interface:
Command line interface
Operating system:
Unix/Linux
Computer skills:
Advanced
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
C, C++
Stability:
Stable

NGSadmix distribution

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No versioning.

NGSadmix support

Maintainer

  • Line Skotte <>

Credits

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Publications

Institution(s)

The Bioinformatics Centre, Department of Biology, University of Copenhagen, Copenhagen; Center for GeoGenetics, National History Museum of Denmark, Copenhagen, Denmark

Funding source(s)

This work was supported in part by LuCamp, Villum Foundation, and the Danish National Research Foundation.

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