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nlme specifications
Information
Unique identifier | OMICS_31759 |
---|---|
Name | nlme |
Alternative name | Linear and Nonlinear Mixed Effects Models |
Software type | Package/Module |
Interface | Command line interface |
Restrictions to use | None |
Operating system | Unix/Linux, Mac OS, Windows |
Programming languages | R |
License | GNU General Public License version 3.0, GNU General Public License version 2.0 |
Computer skills | Advanced |
Version | 3.1-137 |
Stability | Stable |
Source code URL | https://cran.r-project.org/src/contrib/nlme_3.1-137.tar.gz |
Maintained | Yes |
Versioning
No version available
Documentation
- Documentation: https://cran.r-project.org/web/packages/nlme/nlme.pdf
nlme citations
(635)Common drivers of seasonal movements on the migration – residency behavior continuum in a large herbivore
[…] fit quality. We reported the correlation coefficient between explanatory variables in Supplementary Material (Tables and Table ). Analyses were performed using the package “adehabitatHR”, “sp” and “nlme” from R software. […]
Vascular reactivity in small cerebral perforating arteries with 7 T phase contrast MRI – A proof of concept study
[…] . It also allows the use of every detected perforator separately without averaging per subject, increasing the degrees of freedom (, , ). The LME model was fitted and tested for significance with the NLME package (R Core Team) in R (R Foundation for Statistical Computing).Since the MCA data consists of only the subject level, the LME model collapses to ordinary least squares. Therefore, the flow r […]
Sex Differences in Cognitive Decline in Subjects with High Likelihood of Mild Cognitive Impairment due to Alzheimer’s disease
[…] the same sample sizes due to missing values or drop outs. All statistical analyses were conducted in the R (www.r-project.org); mixed-effect models for longitudinal analyses were conducted using the nlme package in the R. All methods were performed in accordance with the relevant guidelines and regulations. […]
Shell colour, temperature, (micro)habitat structure and predator pressure affect the behaviour of Cepaea nemoralis
[…] ant samples. To account for this, we used a linear mixed model with a temporal autocovariate (Turchin ). Linear mixed models were built separately for each principal component. The function lme() in “nlme” package (Pinheiro et al. ) implemented in R (R Core Team ) was used for this purpose. […]
High intensity intermittent games based activity and adolescents’ cognition: moderating effect of physical fitness
[…] Data from the Stroop test and Sternberg paradigm were analysed using R (www.r-project.org). Response time analyses were performed using the nlme package, which implements mixed effect models and yields t statistics. Accuracy analyses were performed using the lme4 package, which implements mixed effect models for data with a binomial outco […]
Larval density mediates knockdown resistance to pyrethroid insecticides in adult Aedes aegypti
[…] e between high and low density, defined as the total number of days from first-instar larva to adult, was quantified using a linear mixed effects model with replicate as a random intercept (R package nlme []). The probability of survival was analyzed using a binomial-distributed generalized linear mixed effects model (GLMM), also with replicate as a random intercept (R package lme4 []). Analyses w […]
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