Non-coding RNA analysis steps

Bioinformatics tools

Databases

Noncoding RNAs (ncRNAs) accomplish a remarkable variety of biological functions. They regulate gene expression at the levels of transcription, RNA processing, and translation. They protect genomes from foreign nucleic acids. They can guide DNA synthesis or genome rearrangement.…

Non-coding RNA analysis software tools and databases

Most Recent Tools

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LncATLAS
Dataset

LncATLAS

Localizes lncRNA in human cells based on RNA-sequencing datasets. LncATLAS…

Localizes lncRNA in human cells based on RNA-sequencing datasets. LncATLAS enables non-expert users to rapidly access a rich variety of easily-interpreted data on their 39 lncRNA of interest. It is…

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Lncident
Desktop

Lncident LncRNAs identification

Identifies Long Non-Coding RNA Identification. Lncident presents an outstanding…

Identifies Long Non-Coding RNA Identification. Lncident presents an outstanding performance on microorganism, which offers a great application prospect to the analysis of microorganism. It provides…

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FARNA
Dataset

FARNA Function Annotation of human non-coding RNA transcripts

Integrates ncRNA information related to expression, pathways and diseases in a…

Integrates ncRNA information related to expression, pathways and diseases in a large number of human tissues and primary cells. FARNA is a knowledgebase of inferred functions of 10,289 human ncRNA…

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ECSBrowser
Dataset

ECSBrowser Escherichia coli Small RNA Browser

Provides an overview of small RNA (sRNA) in E. coli. ECSBrowser is a…

Provides an overview of small RNA (sRNA) in E. coli. ECSBrowser is a comprehensive screening for E. coli sRNAs using a deep sequencing approach. It shows that many as-yet-undiscovered sRNAs are…

Most Popular Tools

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lnCaNet
Dataset

lnCaNet

A comprehensive regulatory network resource for human long non-coding RNAs…

A comprehensive regulatory network resource for human long non-coding RNAs (lncRNAs) and cancer genes. LnCaNet contains the pre-computed 8,494,907 significant co-expression pairs of 9641 lncRNAs and…

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LNCediting
Dataset

LNCediting Long Non Coding editing

A database of comprehensive information about Adenosine-to-Inosine editing…

A database of comprehensive information about Adenosine-to-Inosine editing sites in long non-coding RNAs (lncRNAs) across human, rhesus, mouse, and fly, to explore their potential functions.…

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PLNlncRbase
Dataset

PLNlncRbase

Provides detailed information for experimentally identified plant lncRNAs. In…

Provides detailed information for experimentally identified plant lncRNAs. In the current version, PLNlncRbase has manually collected data from nearly 200 published literature, covering a total of…

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