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NorahDesk specifications
Information
| Unique identifier | OMICS_07365 |
|---|---|
| Name | NorahDesk |
| Software type | Package/Module |
| Interface | Command line interface |
| Restrictions to use | None |
| Operating system | Unix/Linux, Mac OS |
| Programming languages | Java |
| Computer skills | Advanced |
| Version | 1.4 |
| Stability | Stable |
| Requirements |
Bedtools, Vienna RNA
|
| Maintained | Yes |
Versioning
No version available
Maintainer
- person_outline Chikako Ragan
Publication for NorahDesk
library_books
Hybridization-based reconstruction of small non-coding RNA transcripts from deep sequencing data.
2012 Nucleic Acids Res
PMCID: 3439898
PMID: 22705792
DOI: 10.1093/nar/gks505
NorahDesk citation
library_books
Alkbh1 and Tzfp repress a non repeat piRNA cluster in pachytene spermatocytes
2012
Nucleic Acids Res
PMCID: 3505970
PMID: 22965116
DOI: 10.1093/nar/gks839
[…] primary processing pathway or the so-called ping-pong amplification cycle (,,). The production of pachytene piRNAs from long primary transcripts was recently confirmed by Ragan et al. using the novel NORAHDESK tool (). The primary processing probably involves splicing of long transcripts from piRNA-rich genomic sequences called piRNA clusters (,). This process is thought to be independent of the e […]
NorahDesk institution(s)
The University of Queensland, Queensland Brain Institute, Brisbane, Qld, Australia
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