NOVOMIR statistics

info info

Citations per year

Number of citations per year for the bioinformatics software tool NOVOMIR
info

Tool usage distribution map

This map represents all the scientific publications referring to NOVOMIR per scientific context
info info

Associated diseases

info

Popular tool citations

chevron_left miRNA precursor prediction chevron_right
Want to access the full stats & trends on this tool?

NOVOMIR specifications

Information


Unique identifier OMICS_07333
Name NOVOMIR
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Gerhard Steger

Publication for NOVOMIR

NOVOMIR citations

 (2)
library_books

High throughput sequencing identification of novel and conserved miRNAs in the Brassica oleracea leaves

2013
BMC Genomics
PMCID: 3840582
PMID: 24245539
DOI: 10.1186/1471-2164-14-801

[…] et (http://mfold.rna.albany.edu/?q=DINAMelt/software) []. To obtain more reliable miRNA candidates, the precursors that remained after the previous filtering steps were subjected to analysis with the NOVOMIR (http://www.biophys.uni-duesseldorf.de/novomir/) and HuntMi method (http://adaa.polsl.pl/agudys/huntmi/huntmi.htm). The NOVOMIR tool discriminates pre-miRNAs from all other RNAs and is based o […]

library_books

MicroRNAs and their putative targets in Brassica napus seed maturation

2013
BMC Genomics
PMCID: 3602245
PMID: 23448243
DOI: 10.1186/1471-2164-14-140

[…] arched for regions that could be folded into a stable miRNA precursor-like hairpin with strong pairing between the mature miRNA and miRNA* sequence on the opposite hairpin arm. This analysis employed NOVOMIR, a program for the identification of plant miRNA genes []. We identified 78 putative novel miRNA sequences which mapped to 578 genomic loci in B. rapa. To eliminate siRNAs from repeat sequence […]


Want to access the full list of citations?
NOVOMIR institution(s)
Institut für Physikalische Biologie, Heinrich-Heine-Universität Düsseldorf, Düsseldorf, Germany

NOVOMIR review

star_border star_border star_border star_border star_border
star star star star star
Anonymous user #6537's avatar image

Anonymous user #6537

star_border star_border star_border star_border star_border
star star star star star
Desktop
its good