Nuc-Ploc statistics

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Nuc-Ploc specifications

Information


Unique identifier OMICS_18299
Name Nuc-Ploc
Interface Web user interface
Restrictions to use None
Input data A protein sequence.
Programming languages C
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Shen H.B. <>

Publication for Nuc-Ploc

Nuc-Ploc in publications

 (8)
PMCID: 5896989
PMID: 29649330
DOI: 10.1371/journal.pone.0195636

[…] in their web-server named subnucpred for predicting protein sub-nuclear localization with the link of http://proteininformatics.org/mkumar/subnucpred/index.html. the second dataset is in web-sever nuc-ploc [], which was constructed by shen and chou in 2007 and could be downloaded from the link of http://www.csbio.sjtu.edu.cn/bioinf/nuc-ploc/supp-a.pdf. detailed information of these two […]

PMCID: 4783013
PMID: 26954256
DOI: 10.1371/journal.pone.0151035

[…] []) and the netnes 1.1 server [] were used for predictions of nuclear localization signal (nls) and nuclear export signal (nes) in the hex 110 sequence. the web server nuc-ploc (http://chou.med.harvard.edu/bioinf/nuc-ploc) [] was used for predicting hex 110 subnuclear localization., the results shown in the current work are based on immunofluorescence microscopy, […]

PMCID: 4691178
PMID: 26703574
DOI: 10.3390/ijms161226237

[…] two sub-nuclear location datasets and then give the numerical results and analysis., in order to validate the efficiency of the proposed method, two public datasets are adopted in this paper. one is nuc-ploc [], constructed in 2007 by shen and chou, which contains 714 proteins located at nine sub-nuclear locations, listed in . the other is subnucpred [], constructed by ravindra kumar et al. […]

PMCID: 4488245
PMID: 26121669
DOI: 10.1371/journal.pone.0131323

[…] predicts nucleolar localization signals (nols), detects no nols in tcp37/nrbd, but it predicts a nols both for tbp34 and tbp37 in the c-terminal region which is absent from tcp37/nrbd. however, nuc-ploc [], a subnuclear localization predicting server, predicts tbp34, tbp37, and tcp37/nrbd to all have nucleolar localization., nls: nuclear localization signal, nes: nuclear export signal, […]

PMCID: 4368093
PMID: 25793865
DOI: 10.1371/journal.pone.0120646

[…] the sequence consisted of 2543 bp interrupted by two introns of 228 and 138 bp. currently, there is no other study on ghwrky68 from cotton; therefore, we characterised this gene., using the nuc-ploc program and the cello version 2 program, we predicted that ghwrky68 was localised in the nucleus. to test this prediction, 35s::ghwrky68-gfp and 35s::gfp plasmids were constructed, […]


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Nuc-Ploc institution(s)
Institute of Image Processing and Pattern Recognition, Shanghai Jiaotong University, Shanghai, China; School of Information Engineering, Jiangnan University, Wuxi, China; Gordon Life Science Institute, San Diego, CA, USA

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