NucleoATAC specifications


Unique identifier OMICS_13367
Name NucleoATAC
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Aligned PE reads, genome reference, position of regions to analyze
Input format BAM, FASTA, BED
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
License MIT License
Computer skills Advanced
Stability Stable
Maintained Yes


  • Plants and Fungi
    • Saccharomyces cerevisiae
    • Schizosaccharomyces pombe
  • Primates
    • Homo sapiens



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  • person_outline William Greenleaf <>

Publication for NucleoATAC

NucleoATAC institution(s)
Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA; Biophysics Program, Stanford University School of Medicine, Stanford, CA, USA; Department of Applied Physics, Stanford University, Stanford, CA, USA
NucleoATAC funding source(s)
This work is supported by National Science Foundation (DGE-114747), by the National Institutes of Health training grant T32HG000044, P50HG007735 and U19AI057266, and by the Rita Allen Foundation.

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