NucliTrack specifications

Information


Unique identifier OMICS_19409
Name NucliTrack
Software type Application/Script
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
Computer skills Advanced
Version 1.2.0
Stability Stable
Source code URL https://codeload.github.com/samocooper/nuclitrack/tar.gz/1.2.0
Maintained Yes

Download


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Versioning


No version available

Documentation


Maintainer


  • person_outline Sam Cooper

Additional information


https://github.com/samocooper/nuclitrack/blob/master/docs/index.rst

Publication for NucliTrack

NucliTrack citation

library_books

NucliTrack: an integrated nuclei tracking application

2017
Bioinformatics
PMCID: 5860035
PMID: 28637183
DOI: 10.1093/bioinformatics/btx404

[…] that segmentation, track inspection and track correction have to be performed in other software which is non-trivial for scientists with little programming expertise (). Therefore, we have developed NucliTrack an integrated Python package that allows efficient segmentation, feature extraction and tracking of fluorescently labelled nuclei or cells through an intuitive graphical interface (). Addit […]

NucliTrack institution(s)
The Institute of Cancer Research, London, UK; Department of Computational Systems Medicine, Imperial College, South Kensington Campus, London, UK
NucliTrack funding source(s)
Supported by the NIHR Imperial BRC, the STRATiGRAD graduate training program, a BBSRC Strategic LoLa grant (BB/MM00354X/1), a Cancer Research UK Programme Foundation Award (C37275/1A20146).

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