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OASIS specifications

Information


Unique identifier OMICS_12965
Name OASIS
Alternative name Open Access Series of Imaging Studies
Restrictions to use None
Community driven No
Data access Application programming interface
User data submission Not allowed
Maintained No

Maintainer


This tool is not maintained anymore.

Publications for Open Access Series of Imaging Studies

OASIS citations

 (21)
library_books

Generative diffeomorphic modelling of large MRI data sets for probabilistic template construction

2018
Neuroimage
PMCID: 5770340
PMID: 29100938
DOI: 10.1016/j.neuroimage.2017.10.060

[…] pecially in the neck area. This should be attributed to the lack of CSF training labels as well as to a poor multivariate coverage of the cervical region in the available data. In fact, data from the OASIS set is truncated around the first cervical vertebra. The T1-weighted scans of the IXI data set cover up to the C2/C3 vertebral level, but the corresponding T2-and PD-weighted scans do not extend […]

library_books

Networks of myelin covariance

2017
Hum Brain Mapp
PMCID: 5873432
PMID: 29271053
DOI: 10.1002/hbm.23929

[…] p2012/index.php/Challenge_Details). These data were released under the Creative Commons Attribution‐Non‐Commercial (CC BY‐NC) with no end date. The anatomical T1‐weigthed MRI scans originate from the OASIS project (http://www.oasis-brains.org/) and the labeled data were provided by Neuromorphometrics, Inc. (http://Neuromorphometrics.com/) under academic subscription. […]

library_books

Discrete pre processing step effects in registration based pipelines, a preliminary volumetric study on T1 weighted images

2017
PLoS One
PMCID: 5638331
PMID: 29023597
DOI: 10.1371/journal.pone.0186071

[…] Hosted cross-sectional data from the Open Access Series of Imaging Studies (OASIS) project [] were used in this study. 115 participants whose age ranged between 20 and 29 (female = 68, mean age = 22.8 ±2.48) were selected from the entire […]

library_books

Alzheimer’s Disease Early Diagnosis Using Manifold Based Semi Supervised Learning

2017
Brain Sci
PMCID: 5575629
PMID: 28825647
DOI: 10.3390/brainsci7080109

[…] In this study, we aim to perform VBM as a method for investigating neuroanatomical differences in vivo. We exploit the average MRI volume reported for each subject in the OASIS dataset. Our goal is to benefit from the VBM method to obtain the proper spatial masks that we need for capturing the classification features. Here, we are specifically interested in GM and the […]

library_books

From Thirst to Satiety: The Anterior Mid Cingulate Cortex and Right Posterior Insula Indicate Dynamic Changes in Incentive Value

2017
Front Hum Neurosci
PMCID: 5425482
PMID: 28553214
DOI: 10.3389/fnhum.2017.00234

[…] , we also conducted a small volume correction by using a region-of-interest (ROI) encompassing the bilateral insula. This anatomic ROI was obtained using the maximum probability tissue atlas from the OASIS-project) as provided in SPM12 by Neuromorphometrics, Inc., Somerville, MA, USA. under academic subscription.Furthermore, additional models were computed in order to correlate the BOLD signal dur […]

library_books

Characterization of potential driver mutations involved in human breast cancer by computational approaches

2017
Oncotarget
PMCID: 5564847
PMID: 28477017
DOI: 10.18632/oncotarget.17225

[…] m aforesaid tools, many viable techniques, tools, and databases provide significant driver gene mutations, and mutational significance of genes involved in single/multiple cellular pathways, etc. The OASIS web portal is also one of comprehensive resource providing tons of information about somatic mutation, gene expression, copy number alteration, etc. from normal, tumor cases, and cell lines (htt […]

Citations

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OASIS institution(s)
Mallinckrodt Institute of Radiology, Washington University School of Medicine, St Louis, MO, USA; Department of Psychiatry, Northwestern University School of Medicine, Chicago, IL, USA; Department of Neurology, Washington University School of Medicine, St Louis, MO, USA; Department of Psychology, Harvard University, Cambridge, MA, USA; Department of Radiology, Harvard Medical School, Boston, MA, USA; Athinoula Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA; Howard Hughes Medical Institute, Chevy Chase, MA, USA
OASIS funding source(s)
This project was supported by NIH grants P50 AG05681, P01 AG03991, R01 AG021910, P20 MH071616, RR14075, RR 16594, BIRN002, the Alzheimer‘s Association, the James S. McDonnell Foundation, the Mental Illness and Neuroscience Discovery Institute, and the Howard Hughes Medical Institute.

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