OD-seq statistics

info info

Citations per year

Number of citations per year for the bioinformatics software tool OD-seq

Tool usage distribution map

This map represents all the scientific publications referring to OD-seq per scientific context
info info

Associated diseases


Popular tool citations

chevron_left Multiple sequence alignment quality control chevron_right
Want to access the full stats & trends on this tool?

OD-seq specifications


Unique identifier OMICS_09758
Name OD-seq
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data OD-seq can take a MSA, distance matrix or set of unaligned sequences as input.
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes




No version available


  • person_outline Higgins Desmond G.

Publication for OD-seq

OD-seq citation


LEON BIS: multiple alignment evaluation of sequence neighbours using a Bayesian inference system

BMC Bioinformatics
PMCID: 4936259
PMID: 27387560
DOI: 10.1186/s12859-016-1146-y

[…] ivergent segments in MSAs. The method was used to identify badly annotated introns/exons in sets of orthologous proteins generated by a large-scale avian phylogenomics project. Another recent method, OD-seq [], is designed to find outlier sequences by examining the average distance of each sequence to the rest and represents a useful, fast method for checking very large alignments containing thous […]

Want to access the full list of citations?
OD-seq institution(s)
UCD Conway Institute of Biomolecular and Biomedical Sciences, University College Dublin, Dublin, Ireland
OD-seq funding source(s)
Funding was provided by Science Foundation Ireland to DGH through PI grant 11/PI/1034.

OD-seq reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review OD-seq