OGEE specifications

Information


Unique identifier OMICS_08727
Name OGEE
Alternative name Online GEne Essentiality database
Restrictions to use None
Maintained Yes

Maintainer


  • person_outline Wei-Hua Chen

Publication for Online GEne Essentiality database

OGEE citations

 (2)
library_books

A Comprehensive Overview of Online Resources to Identify and Predict Bacterial Essential Genes

2017
Front Microbiol
PMCID: 5711816
PMID: 29230204
DOI: 10.3389/fmicb.2017.02331

[…] abase of predicted Essential Genes (pDEG). Many detailed information of the predicted essential genes are provided in the database, and the records can be freely accessed and downloaded ().OGEE is an Online GEne Essentiality database. Both essential and non-essential genes obtained from large-scale experiments are openly accessible in this database. The developers also complement their data with t […]

library_books

Selection for energy efficiency drives strand biased gene distribution in prokaryotes

2017
Sci Rep
PMCID: 5585166
PMID: 28874819
DOI: 10.1038/s41598-017-11159-3

[…] rom NCBI GEO database for the three model bacteria Escherichia coli , Bacillus subtilis and Mycoplasma pneumoniae . Gene essentiality data for selected model organisms were downloaded from OGEE – an online gene essentiality database.Genome sequences and annotation for all completely sequenced prokaryotes were downloaded from NCBI Genbank. Genomic coordinates for replication starts were downloaded […]

OGEE institution(s)
European Molecular Biology Laboratory (EMBL), Heidelberg, Institute for Computer Science, Heinrich-Heine-University Düsseldorf, Düsseldorf and Max-Delbrück-Centre for Molecular Medicine, Berlin-Buch, Berlin, Germany

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