OMA and OPA specifications

Information


Unique identifier OMICS_25037
Name OMA and OPA
Alternative name Oligonucleotide Mass Assembler and the Oligonucleotide Peak Analyzer
Software type Application/Script
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
Computer skills Medium
Version 1
Stability Stable
Maintained No

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Publication for Oligonucleotide Mass Assembler and the Oligonucleotide Peak Analyzer

OMA and OPA citation

library_books

The identification and characterization of non coding and coding RNAs and their modified nucleosides by mass spectrometry

2015
RNA Biol
PMCID: 4615682
PMID: 25616408
DOI: 10.4161/15476286.2014.992280

[…] s.In addition to these databases, stand-alone software also exists to assist in the interpretation and annotation of raw mass spectral data, including MS/MS data. Nyakas et al. developed the programs OMA and OPA, which allow analysis of MS and MS/MS data with a customizable database of nucleotides, thus all known RNA modifications can be analyzed. Most recently, we have reported on the software pr […]

OMA and OPA institution(s)
Genome BC Proteomics Centre, University of Victoria, Victoria, BC, Canada

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