OMGene specifications


Unique identifier OMICS_23426
Name OMGene
Alternative name Optimise My Gene
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A set of gene models and a genome.
Input format GTF+FASTA
Output data Some gene model variants.
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Requirements Bedtools, Exonerate
Maintained Yes



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  • person_outline Steven Kelly <>

Publication for Optimise My Gene

OMGene institution(s)
Department of Plant Sciences, University of Oxford, Oxford, UK
OMGene funding source(s)
Supported by a Royal Society University Research Fellow, by the European Union’s Horizon 2020 research and innovation programme under grant agreement number 637765 and by an EPSRC studentship through EP/G03706X/1.

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