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Oncopression specifications

Information


Unique identifier OMICS_19959
Name Oncopression
Software type Application/Script
Interface Web user interface
Restrictions to use None
Input data A gene name.
Computer skills Basic
Stability Stable
Maintained Yes

Maintainers


  • person_outline Jungsul Lee
  • person_outline Chulhee Choi

Publication for Oncopression

Oncopression citations

 (2)
library_books

Robust method for identification of prognostic gene signatures from gene expression profiles

2017
Sci Rep
PMCID: 5717170
PMID: 29208919
DOI: 10.1038/s41598-017-17213-4

[…] ableĀ ). We used Entrez Gene ID (ver. 17.0; BrainArray) to summarize the probes and then converted the data to HPRD protein ID (ver 9.0) data. The normalized data were reported previously (https://www.oncopression.com). Data from TCGA (METABRIC), which contain information on individual patients, were downloaded from the cBioportal for Cancer Genomics operated by Memorial Sloan-Kettering Cancer Cent […]

library_books

Strategies of Mesenchymal Invasion of Patient derived Brain Tumors: Microenvironmental Adaptation

2016
Sci Rep
PMCID: 4842976
PMID: 27108713
DOI: 10.1038/srep24912

[…] GEO) microarray database was utilized to provide the expression profiles of the genes of interest. The GEO microarray data is based on GPL570 Affymetric GeneChip Human Genome U133 Plus 2.0 array. The Oncopression analysis tool (www.oncopression.com) was used to retrieve mRNA expression data for genes of interest from all available GBM tumor samples, including HA receptors (CD44, RHAMM), HA synthas […]


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Oncopression institution(s)
Department of Bio and Brain Engineering, KAIST, Daejeon, Korea; Cellex Life Sciences Inc, Daejeon, Korea
Oncopression funding source(s)
Supported by the National Research Foundation of Korea (NRF) funded by the Ministry of Science, ICT & Future Planning (NRF- 2016M3A9B6945831).

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