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OpenMEEG specifications

Information


Unique identifier OMICS_15268
Name OpenMEEG
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data EIT electrodes description, Internal points description, head description (geometry, conductivities), sources description, EEG sensors description, MEG sensors description.
Output data EIT gain matrix, EEG gain matrix, MEG gain matrix, Internal potential gain matrix Unix/Linux, Mac OS, Windows.
Operating system Unix/Linux, Mac OS, Windows
Programming languages C, C++, MATLAB, Python
License Other
Computer skills Advanced
Version 2.3.0.1
Stability Stable
Maintained Yes

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Versioning


No version available

Maintainer


  • person_outline Maureen Clerc

Publication for OpenMEEG

OpenMEEG citations

 (52)
call_split

Long term impacts of prenatal synthetic glucocorticoids exposure on functional brain correlates of cognitive monitoring in adolescence

2018
Sci Rep
PMCID: 5955898
PMID: 29769646
DOI: 10.1038/s41598-018-26067-3
call_split See protocol

[…] 152 template in Brainstorm. The four different compartments of the head model (scalp, outer and inner skull, cortex) were extracted using the Boundary Element Method (BEM) that is also implemented in OpenMEEG. A Brainstorm provided default brain surface of 15002 nodes was used for computing the aforementioned compartments. sLORETA computes the current source density distribution for every cortical […]

call_split

Effect of word association on linguistic event related potentials in moderately to mildly constraining sentences

2018
Sci Rep
PMCID: 5940757
PMID: 29740165
DOI: 10.1038/s41598-018-25723-y
call_split See protocol

[…] ailable under the GNU general public license. As our head model, we used the ICBM152 template as the default template, an average of 152 subjects. The forward model used to compute the head model was OpenMEEG BEM, for which we took 15000 dipoles uniformly distributed over the cortical surface. For each subject separately, a subset of bad channels (between 2 and 11 channels, avr 5.2) with largest a […]

call_split

The neural encoding of information prediction errors during non instrumental information seeking

2018
Sci Rep
PMCID: 5904167
PMID: 29666461
DOI: 10.1038/s41598-018-24566-x
call_split See protocol

[…] Brainstorm, based on electrode locations relative to a standard Montreal Neurological Institute structural brain (Colin27) and a forward model based upon a boundary element model (BEM) generated with OpenMEEG software. Anterior cingulate cortex activation was then calculated based on coordinates from a standard automatic parcellation of the cingulate cortex into ROIs. Timecourses of source activit […]

library_books

A statistical method for analyzing and comparing spatiotemporal cortical activation patterns

2018
Sci Rep
PMCID: 5882928
PMID: 29615797
DOI: 10.1038/s41598-018-23765-w

[…] red and corrected resting state data set of 3 minutes and utilized for all other recordings of the same participant. For MEG, an overlapping spheres head model, for EEG a boundary element model (BEM, OpenMEEG software was utilized. A weighted minimum-norm estimated (wMNE) was then used as inverse solution to project the measured data to the cortical surface with no orientation constraints of the s […]

library_books

The FieldTrip SimBio pipeline for EEG forward solutions

2018
Biomed Eng Online
PMCID: 5870695
PMID: 29580236
DOI: 10.1186/s12938-018-0463-y

[…] n to achieve the best combination of accuracy, robustness, and computation speed [, , , ]. Furthermore, the St. Venant FEM was also compared to two BEM approaches, the symmetric BEM as implemented in OpenMEEG [] and a double-layer BEM approach, in both (tetrahedral) sphere models and in a realistic head model. Again, the St. Venant FEM was shown to achieve high accuracies and fast computation spee […]

call_split

Observation of Point Light Walker Locomotion Induces Motor Resonance When Explicitly Represented; An EEG Source Analysis Study

2018
Front Psychol
PMCID: 5857608
PMID: 29593607
DOI: 10.3389/fpsyg.2018.00303
call_split See protocol

[…] ree to assume whichever orientation. The EEG forward modeling of volume currents was completed with a three-layers (head, outer, and inner skull) symmetric boundary element model (BEM) generated with OpenMEEG (Gramfort et al., ). A diagonal noise covariance matrix was computed for each participant using the pre-stim interval to estimate the sensors variance. Sources intensities were estimated thro […]

Citations

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OpenMEEG institution(s)
Athena Project Team, INRIA Sophia Antipolis Méditerranée, France; Parietal Project Team, INRIA Saclay Ile-de-France, France
OpenMEEG funding source(s)
This work was supported by the ANR grant ViMAGINE ANR-08-BLAN-0250-02, and by a PhD grant from the Regional Council of Provence Alpes Cote d'Azur.

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