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Operon structure prediction software tools | RNA sequencing data analysis

The use of high-throughput RNA sequencing to predict dynamic operon structures in prokaryotic genomes has recently gained popularity in bioinformatics.Source text:(Fortino et al., 2016) CONDOP: an R package for CONdition-Dependent Operon…
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CONDOP
Desktop

CONDOP

Uses transcriptomic features extracted from RNA-seq transcriptome profiles to…

Uses transcriptomic features extracted from RNA-seq transcriptome profiles to develop ensemble classifiers for condition-dependent operon predictions. The CONDOP package provides a deeper insight…

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PredictRegulon
Web

PredictRegulon

Allows users to submit known or experimentally determined binding sites of a…

Allows users to submit known or experimentally determined binding sites of a regulatory protein as ungapped multiple sequence alignments. PredictRegulon is a web server tool for genome-wide…

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