OPTricluster specifications


Unique identifier OMICS_17753
Name OPTricluster
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
Computer skills Medium
Stability Stable
Maintained Yes




No version available

Publication for OPTricluster

OPTricluster citation


A survey of computational tools for downstream analysis of proteomic and other omic datasets

Hum Genomics
PMCID: 4624643
PMID: 26510531
DOI: 10.1186/s40246-015-0050-2

[…] ectangular graphical widgets called probabilistic time boxes. The analysis is fully interactive, and the graphical display shows the time courses along with the graphical query. In JAVA, PESTS [] and OPTricluster [] both of which are stand-alone with a GUI interface are useful for the clustering of short time-series data in MATLAB. DynamiteC is a dynamic modeling and clustering algorithm which int […]

OPTricluster institution(s)
Knowledge Discovery Group, Institute for Information Technology, National Research Council Canada, Ottawa, ON, Canada; Seed Systems Group, Plant Biotechnology Institute, Saskatoon, SK, Canada; Oil Crops Research, Institute, Chinese Academy of Agricultural Sciences, Wuhan, Hubei, China
OPTricluster funding source(s)
This work was supported by Genomics and Health Initiative, Institute for Information Technology, and Plant Biotechnology Institute of the National Research Council Canada.

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