OGDRAW specifications

Information


Unique identifier OMICS_06235
Name OGDRAW
Alternative name OrganellarGenomeDraw
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
Computer skills Medium
Stability Stable
Maintained Yes

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Information


Unique identifier OMICS_06235
Name OGDRAW
Alternative name OrganellarGenomeDraw
Interface Web user interface
Restrictions to use None
Programming languages Perl
Computer skills Basic
Stability Stable
Maintained Yes

OGDRAW article

OGDRAW citations

 (3)
2017
PMCID: 5496520

[…] of the corresponding bases. codon usage was calculated by the codon usage database (http://www.kazusa.or.jp/codon/). the gene map of the complete mitogenome was depicted by ogdraw (http://ogdraw.mpimp-golm.mpg.de/)., to illustrate the phylogenetic relationships among sea anemone, the complete mitogenomes of 23 anthozoa species were downloaded from the genbank database, including […]

2016
PMCID: 4780714

[…] searches against the same database of plastomes. finally, trnascan-se v1.21 [38] was also used to further verify the trna genes. the schematic diagram of the plastid genome map was generated using ogdraw [39]., genome-size variation among different photosynthetic species is generally caused by different junctions between the two inverted-repeat regions (ira and irb) and the two single-copy […]

2012
PMCID: 3386957

[…] gr. andersonii and gracilariophila oryzoides [14]. transfer rna (trna) genes were identified with trnascan-se 1.21 software [34]. mitochondrial genome map of gr. lemaneiformis was produced by using ogdraw software [35]. sequence alignment and base composition were conducted using mega 4.0 software [36]., phylogenetic analyses of the red algal species were performed based on the following data […]

OGDRAW institution(s)
Max-Planck-Institut für Molekulare Pflanzenphysiologie, Potsdam-Golm, Germany

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