Organelle_PBA specifications

Information


Unique identifier OMICS_15367
Name Organelle_PBA
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Requirements BioPerl, Seqtk, BlastN, BlasR, Samtools, Bedtools, Sprai, WGS-Assembler, SSPACE-Long
Maintained Yes

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Documentation


Maintainer


  • person_outline Aureliano Bombarely <>

Publication for Organelle_PBA

Organelle_PBA institution(s)
Department of Horticulture, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA; Department of Horticulture, Faculty of Horticultural Sciences and Plant Protection, University of Tehran, Karaj, Iran; Department of Plant Pathology, Physiology and Weed Science, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA; Kentucky Tobacco Research and Development Center (KTRDC), University of Kentucky, Lexington, KY, USA
Organelle_PBA funding source(s)
This study was financially supported by the Plant and Microbial Genomic Cluster start up funds supplied by Virginia Tech.

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